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Cheap flights from Manila to Kota Kinabalu from ₱3,303

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 3/19. Fares are subject to change and may not be available on all flights or dates of travel.
MNL — BKI
feb. 23 — mrt. 21
1 adult

The best prices from Manila Ninoy Aquino Intl to Kota Kinabalu are usually found in November or June, booked 78 days in advance, depart on a Wednesday or Thursday and return on a Thursday

Cheap flight deals from Manila to Kota Kinabalu

Discover tips and strategies to find the most affordable flight options for your journey from Manila (MNL) to Kota Kinabalu (BKI). Learn about various techniques such as flexible date searches, comparing prices across and setting up price alerts. Use these methods to find the cheapest flights available for your travel needs. Data last updated februari 18, 2025.

Round-trip from

₱7,128

One-way from

₱3,303

Popular in

January

Cheapest in

November

Average price

₱7,359

Good round-trip deal

₱7,230 or less

Good one-way deal

₱3,439 or less
Philippines AirAsia
  • Philippines AirAsia
  • 3/19-3/23
  • Nonstop
  • 4h 15m total
  • Manila to Kota Kinabalu
Search Deals
Philippines AirAsia
  • Philippines AirAsia
  • 3/19
  • Nonstop
  • 2h 15m total
  • Manila to Kota Kinabalu
Search Deals
Highest demand for flights based on searches. 8% potential increase in price (₱37,718 potential increase over avg. RT price).
Search Deals
Cheapest flight prices on average. 1% potential price decrease (₱4,989 potential savings vs. average RT price).
Search Deals
Average for round-trip flights in February 2025
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Price to beat on a round-trip flight from Manila Ninoy Aquino Intl to Kota Kinabalu.
Search Deals
Price to beat on a one-way flight from Manila Ninoy Aquino Intl to Kota Kinabalu.
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Find flight deals from Manila to Kota Kinabalu

Cheapest flights from Manila to Kota Kinabalu
Explore the most affordable flight options available from Manila to Kota Kinabalu. Find the lowest fares from popular airlines and budget airlines, with prices last updated on februari 18, 2025.

wo 3/194:15 pmMNL - BKI
Nonstop2h 15mPhilippines AirAsia
zo 3/236:55 pmBKI - MNL
Nonstop2h 00mPhilippines AirAsia
Deal found 2/17₱7,128
wo 3/196:30 amMNL - BKI
1 stop10h 00mMultiple Airlines
zo 3/236:55 pmBKI - MNL
Nonstop2h 00mMultiple Airlines
Deal found 2/17₱8,460
wo 3/196:30 amMNL - BKI
1 stop10h 00mScoot
wo 3/268:05 pmBKI - MNL
1 stop22h 25mScoot
Deal found 2/17₱8,576
do 4/179:35 pmMNL - BKI
1 stop10h 35mRoyal Brunei Airlines
zo 4/209:20 pmBKI - MNL
1 stop23h 25mRoyal Brunei Airlines
Deal found 2/17₱15,298
wo 5/148:20 amMNL - BKI
1 stop10h 00mChina Southern
zo 5/187:20 pmBKI - MNL
1 stop21h 25mChina Southern
Deal found 2/17₱20,398
zo 9/2111:20 pmMNL - BKI
1 stop24h 10mJeju Air
di 9/2312:30 amBKI - MNL
1 stop21h 50mJeju Air
Deal found 2/17₱24,280
za 9/203:55 amMNL - BKI
1 stop20h 35mChina Eastern
di 9/231:30 amBKI - MNL
1 stop23h 50mChina Eastern
Deal found 2/17₱29,553
wo 3/1911:50 pmMNL - BKI
1 stop24h 45mAsiana Airlines
di 3/2512:40 amBKI - MNL
1 stop21h 50mAsiana Airlines
Deal found 2/17₱39,462
wo 5/146:50 amMNL - BKI
1 stop14h 45mMalaysia Airlines
zo 5/1812:50 pmBKI - MNL
2 stops17h 20mMalaysia Airlines
Deal found 2/17₱54,760

Find flights from Manila to Kota Kinabalu within your budget

Customize your flight search to find flights from Manila to Kota Kinabalu that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 411,093 searches. Data last updated februari 18, 2025.

Fly from

Manila

Fly to

Kota Kinabalu

Route

Depart

Return

Price

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

wo 3/19

4:15 pm-6:30 pm

Nonstop2h 15m

Kota Kinabalu

zo 3/23

6:55 pm-8:55 pm

Nonstop2h 00m

₱7,128

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

wo 3/19

6:30 am-4:30 pm

1 stop10h 00m

Kota Kinabalu

zo 3/23

6:55 pm-8:55 pm

Nonstop2h 00m

₱8,460

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

wo 3/19

6:30 am-4:30 pm

1 stop10h 00m

Kota Kinabalu

wo 3/26

8:05 pm-6:30 pm

1 stop22h 25m

₱8,576

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

do 4/17

9:35 pm-8:10 am

1 stop10h 35m

Kota Kinabalu

zo 4/20

9:20 pm-8:45 pm

1 stop23h 25m

₱15,298

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

wo 5/14

8:20 am-6:20 pm

1 stop10h 00m

Kota Kinabalu

zo 5/18

7:20 pm-4:45 pm

1 stop21h 25m

₱20,398

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

wo 5/14

11:20 pm-11:30 pm

1 stop24h 10m

Kota Kinabalu

za 5/17

12:30 am-10:20 pm

1 stop21h 50m

₱28,626

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

wo 3/19

11:50 pm-12:35 am

1 stop24h 45m

Kota Kinabalu

di 3/25

12:40 am-10:30 pm

1 stop21h 50m

₱39,462

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

wo 5/14

6:50 am-9:35 pm

1 stop14h 45m

Kota Kinabalu

zo 5/18

12:50 pm-6:10 am

2 stops17h 20m

₱54,760

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

wo 3/19

4:15 pm-6:30 pm

Nonstop2h 15m

₱3,303

ManilaKota Kinabalu

MNL - BKI

MNLBKI

Manila Ninoy Aquino Intl

di 3/18

7:30 pm-4:30 pm

1 stop21h 00m

₱4,114

Flights are sorted by cheapest round-trip flights first.

Deals found on 2/17

Showing 1-10 of 12 results
1
2

Best time to book a flight from Manila to Kota Kinabalu

Have a flexible travel schedule? Discover the best time to fly to Kota Kinabalu from Manila with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Travel insights for flights from Manila to Kota Kinabalu

Get recent, data-driven insights about flights from Manila to Kota Kinabalu including ideal travel times, pricing trends, and more.

How far ahead should I book a flight from Manila to Kota Kinabalu?

Use this chart to determine the optimal time to book a round-trip flight from Manila to Kota Kinabalu. Price data was last updated on February 14, 2025.

The price you pay for your flight from Manila to Kota Kinabalu may vary depending on when you book. For the best chance of a lower fare, look to book 78 days in advance of your trip. Fares are likely to increase a fortnight or so before your departure date.

What is the cheapest month to book a flight from Manila to Kota Kinabalu?

Currently, January is the cheapest month in which you can book a flight from Manila to Kota Kinabalu (average of ₱83). Flying from Manila to Kota Kinabalu in October is currently the most expensive (average of ₱119). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

What is the cheapest time of day to fly from MNL to BKI?

Find hourly flight availability from Manila to Kota Kinabalu. Discover flight options and departure times throughout the day, allowing you to choose a departure time that suits your schedule. Data last updated februari 18, 2025.

It’s typically best to fly out from Manila to Kota Kinabalu in the morning. Doing so could potentially save you 46% on the flight price compared to flying at noon, which is usually more expensive.

Rainfall in Kota Kinabalu by month

Plan your trip to Kota Kinabalu by taking into account the average rainfall totals by month.

In terms of precipitation, rainfall in Kota Kinabalu ranges from 60.0 - 351.0 inches per month. October is typically the wettest month, when rainfall can reach 351.0 mm. February is typically the driest time to visit Kota Kinabalu when rainfall is around 60.0 mm.

Temperature in Kota Kinabalu by month

Plan your trip to Kota Kinabalu by taking into account the average temperature totals by month.

If weather is an important factor for your trip to Kota Kinabalu, use this chart to help with planning. For those seeking warmer temperatures, April is the ideal time of year to visit, when temperatures reach an average of 27.0 C. Travelers looking to avoid the cold should look outside of January, when temperatures are typically at their lowest (around 26.0 C).

Reviews of airlines servicing Kota Kinabalu

Get insights into the airlines that provide service to Kota Kinabalu. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Kota Kinabalu. Reviews last updated februari 18, 2025.
Asiana Airlines
8.3
Very good
447 reviews
Check prices

Comfort

8.1

Boarding

8.4

Food

8.1

Overall

8.3

Crew

8.5

Entertainment

7.8

Reviews

1 / 20

2.0
Mediocre

Alex,Nov 2024

ICN - SIN

Next time I never flight with Asiana Airlines, not anymore, this is my first time also my last time

Asiana Airlines
8.3
Very good
447 reviews
Asiana Airlines
8.3
Very good
447 reviews
Check prices

Comfort

8.1

Boarding

8.4

Food

8.1

Overall

8.3

Crew

8.5

Entertainment

7.8

Reviews

1 / 20

2.0
Mediocre

Alex,Nov 2024

ICN - SIN

Next time I never flight with Asiana Airlines, not anymore, this is my first time also my last time

China Southern
7.6
Good
88 reviews
Asiana Airlines
8.3
Very good
447 reviews
Check prices

Comfort

8.1

Boarding

8.4

Food

8.1

Overall

8.3

Crew

8.5

Entertainment

7.8

Reviews

1 / 20

2.0
Mediocre

Alex,Nov 2024

ICN - SIN

Next time I never flight with Asiana Airlines, not anymore, this is my first time also my last time

Malaysia Airlines
7.4
Good
267 reviews
Asiana Airlines
8.3
Very good
447 reviews
Check prices

Comfort

8.1

Boarding

8.4

Food

8.1

Overall

8.3

Crew

8.5

Entertainment

7.8

Reviews

1 / 20

2.0
Mediocre

Alex,Nov 2024

ICN - SIN

Next time I never flight with Asiana Airlines, not anymore, this is my first time also my last time

Philippines AirAsia
6.7
Okay
112 reviews
Asiana Airlines
8.3
Very good
447 reviews
Check prices

Comfort

8.1

Boarding

8.4

Food

8.1

Overall

8.3

Crew

8.5

Entertainment

7.8

Reviews

1 / 20

2.0
Mediocre

Alex,Nov 2024

ICN - SIN

Next time I never flight with Asiana Airlines, not anymore, this is my first time also my last time

Related info for your journey

Find useful and relevant information for your journey from Manila to Kota Kinabalu. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • How popular is this Manila to Kota Kinabalu flight route?

    This flight path from Manila Ninoy Aquino Intl to Kota Kinabalu was viewed by 1,000 users in the past month. Keep an eye out for changes in search interest prior to high and low season.

  • What are the cheapest airlines flying from Manila to Kota Kinabalu round-trip?

    Flying on Philippines AirAsia is currently your cheapest option to Kota Kinabalu, with prices starting at ₱7,128. Additional round-trip tickets that might be worth considering are offered by Scoot and Royal Brunei Airlines, with the lowest prices starting at ₱8,576 and ₱15,298, respectively.

  • What are the cheapest airlines to fly from Manila to Kota Kinabalu one-way?

    ₱3,303 is the cheapest one-way deal found within the past few days, from Philippines AirAsia. You may also be able to find cheap deals on Scoot and AirAsia, with prices starting from ₱4,114 and ₱6,780, respectively.

  • What are the cheapest flights from Manila to Kota Kinabalu?

    On average you can expect to pay ₱6,943 for a flight from Manila to Kota Kinabalu. The cheapest flight overall is ₱3,070 while the most popular route, (Manila Ninoy Aquino Intl - Kota Kinabalu) is currently priced at ₱6,896.

  • Can I find deals for flights from Manila to Kota Kinabalu that include hotel bookings?

    Yes. In addition to deals on Manila to Kota Kinabalu flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from Manila to Kota Kinabalu?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Manila to Kota Kinabalu.

  • Can I find deals for business class flights from Manila to Kota Kinabalu?

    Yes. Cheapflights offers flight deals from Manila to Kota Kinabalu by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Manila to Kota Kinabalu?

    Currently, January is the cheapest month in which you can book a flight from Manila to Kota Kinabalu (average of ₱83). Flying from Manila to Kota Kinabalu in October is currently the most expensive (average of ₱119). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

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Fly from Manila to Kota Kinabalu on these airlines

Choose from the following airlines for your flight from Manila to Kota Kinabalu. Flights are based on user searches made on Cheapflights and were last updated on februari 18, 2025.
Philippines AirAsia flights from Manila Ninoy Aquino Intl to Kota Kinabalu
Scoot flights from Manila Ninoy Aquino Intl to Kota Kinabalu

Top 5 airlines flying from Manila to Kota Kinabalu

Discover the top 5 airlines that operate flights from Manila to Kota Kinabalu. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 411,093 searches. Data last updated februari 18, 2025.
AirlineCheapestAverageFlexibilityOn-time
Philippines AirAsiaCheapest₱4,762Average₱6,818FlexibilityNo cancel feeOn-time53%
Search Philippines AirAsia flights
ScootCheapest₱8,842Average₱10,696FlexibilityNo cancel feeOn-timeN/A
Search Scoot flights
AirAsiaCheapest₱10,618Average₱14,884FlexibilityNo cancel feeOn-time66%
Search AirAsia flights
Philippine AirlinesCheapest₱17,076Average₱19,795FlexibilityNo cancel feeOn-time60%
Search Philippine Airlines flights
Malaysia AirlinesCheapest₱18,156Average₱23,061FlexibilityNo cancel feeOn-time67%
Search Malaysia Airlines flights

Fly with Cheapflights

Find the best flight deals on Cheapflights, where travelers can enjoy low prices and a wide availability of flights to their desired destinations.

How does Cheapflights help users find flights from Manila to Kota Kinabalu?

Cheapflights makes it easy to find Manila to Kota Kinabalu flights by helping our users search from 900+ travel sites for deals. We also provide you with filters for cabin, price, airline, airports, number of stops, and many more to narrow down that perfect flight.

Why should you use Cheapflights to find cheap flight tickets from Manila to Kota Kinabalu?

By finding flights from multiple airlines and providers at completely no cost, Cheapflights helps millions of users like you annually find the best flights to Kota Kinabalu from Manila.

Can Cheapflights find flights from Manila to Kota Kinabalu with no change fees?

Need flexible booking options for your flight to Kota Kinabalu from Manila? Don’t worry, Cheapflights have you covered. Use our search filter to only show flights with no change fees.

Can Cheapflights notify me if prices for flights from Manila to Kota Kinabalu become cheaper?

Yes, Cheapflights offers price alerts on Manila to Kota Kinabalu flights so you can book your travel at the perfect time. Price Alerts can be enabled by clicking the bell icon next to the flight deals above and providing your email address where you want to receive the alerts.

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